Job Description A0PJY2 Confidence 99.62% Date Fri May 25 09:29:34 BST 2012 Rank 24 Aligned Residues 86 % Identity 35% Template c1tf3A_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:transcription factor iiia; PDBTitle: tfiiia finger 1-3 bound to dna, nmr, 22 structures Resolution UNK

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		341	.	.	.	.	.	.	.			.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.			.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.			.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure										.	.																												.	.																														.	.
Query SS confidence										.	.																												.	.																														.	.
Query Sequence		Y	K	P	F	V	C	E	F	.	.	C	G	K	G	F	H	Q	K	G	N	Y	K	N	H	K	L	T	H	S	G	E	K	Q	F	K	C	N	.	.	I	C	N	K	A	F	H	Q	V	Y	N	L	T	F	H	M	H	T	H	N	D	K	K	P	F	T	C	P	T	.	.	C	G	K	G	F	C	R	N	F	D
Query Conservation										.	.																												.	.																														.	.
Alig confidence										.	.																												.	.																														.	.
Template Conservation
Template Sequence		M	K	R	Y	I	C	S	F	A	D	C	G	A	A	Y	N	K	N	W	K	L	Q	A	H	L	S	K	H	T	G	E	K	P	F	P	C	K	E	E	G	C	E	K	G	F	T	S	L	H	H	L	T	R	H	S	L	T	H	T	G	E	K	N	F	T	C	D	S	D	G	C	D	L	R	F	T	T	K	A	N
Template Known Secondary structure								S	S	G	G	G					S	S																S						S	S						S	S	T	T											T							S	S	S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		415	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	K	H	V	R	K	L	H	D	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	K	K	H	F	N	R	F	H	N	I	K
Template Known Secondary structure										T	T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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