Job Description A0PJY2 Confidence 99.72% Date Fri May 25 09:29:34 BST 2012 Rank 15 Aligned Residues 81 % Identity 28% Template c1llmC_ PDB info PDB header:transcription/dna Chain: C: PDB Molecule:chimera of zif23-gcn4; PDBTitle: crystal structure of a zif23-gcn4 chimera bound to dna Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	F	V	C	E	F	C	G	K	G	F	H	Q	K	G	N	Y	K	N	H	K	L	T	H	S	G	E	K	Q	F	K	C	N	I	C	N	K	A	F	H	Q	V	Y	N	L	T	F	H	M	H	T	H	N	D	K	K	P	F	T	C	P	T	C	G	K	G	F	C	R	N	F	D	L	K	K	H	V	R	K
Query Conservation
Alig confidence																																																							.
Template Conservation																																																							.
Template Sequence		K	P	F	Q	C	R	I	C	M	R	N	F	S	R	S	D	H	L	T	T	H	I	R	T	H	T	G	E	K	P	F	A	C	D	I	C	G	R	K	F	A	R	S	D	E	R	K	R	H	R	D	I	Q	.	H	I	L	P	I	L	E	D	K	V	E	E	L	L	S	K	N	Y	H	L	E	N	E	V	A	R
Template Known Secondary structure							T	T	T					S																					T	T	T					S	S												.	T
Template Predicted Secondary structure																																																							.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		422	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		181	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions