 |
| Job Description | A0PJY2 | | Confidence | 99.55% | Date | Fri May 25 09:29:34 BST 2012 |
| Rank | 33 | Aligned Residues | 55 |
| % Identity | 27% | Template | c1bboA_ |
| PDB info |
PDB header:dna-binding protein | Chain: A: PDB Molecule:human enhancer-binding protein mbp-1; |
PDBTitle: high-resolution solution structure of the double cys2*his22 zinc finger from the human enhancer binding protein mbp-1
|
| Resolution | UNK |
|
 |
|   |   |
371 | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | F | K | C | N | I | C | N | K | A | F | H | Q | V | Y | N | L | T | F | H | M | H | T | H | N | D | K | K | P | F | T | C | P | T | C | G | K | G | F | C | R | N | F | D | L | K | K | H | V | R | K | L | H | D | S | S |
| Query Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |
|   |   |
|   |   | . |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
| Template Sequence |   |
K | Y | I | C | E | E | C | G | I | . |
R | K | K | P | S | M | L | K | K | H | I | R | T | H | T | D | V | R | P | Y | H | C | T | Y | C | N | F | S | F | K | T | K | G | N | L | T | K | H | M | K | S | K | A | H | S | K |
| Template Known Secondary structure |   |
|
|
|
| T | T | T |
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  | T | S | S |
|
|
|  |  |
| S | S | S | S |
|  |  | S | S |  |  |  |  |  |  |  |  |  | S | S | S | S |
|
|
| Template Predicted Secondary structure |   |
|  |  |
|
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
1 | . | . | . | . | . | . | . | . | |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|