Job Description O75791 Confidence 46.11% Date Wed May 9 17:39:07 BST 2012 Rank 291 Aligned Residues 84 % Identity 21% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																									.												.	.	.
Query SS confidence																																																									.												.	.	.
Query Sequence		N	F	I	D	I	Q	F	P	K	W	F	H	E	G	L	S	R	H	Q	A	E	N	L	L	M	G	K	E	V	G	F	F	I	I	R	A	S	Q	S	S	P	G	D	F	S	I	S	V	R	H	E	D	D	V	Q	.	H	F	K	V	M	R	D	N	K	G	N	.	.	.	Y	F	L	W	T	E	K	F	P	S
Query Conservation																																																									.												.	.	.
Alig confidence																																																									.												.	.	.
Template Conservation
Template Sequence		S	H	X	H	R	V	I	N	H	P	Y	Y	F	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	Q	R	Y	H	D
Template Known Secondary structure									T		T	T	B													T	T	S		T	T									S	T	T											T	T																				S	S	S				S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		125	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	K	L	V	D	Y	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	Q	I	I	V	E	Y
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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