Return to main results Retrieve Phyre Job Id

Job DescriptionO75791
Confidence99.64%DateWed May 9 17:39:07 BST 2012
Rank192Aligned Residues56
% Identity34%Templatec2vknA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:protein ssu81; PDBTitle: yeast sho1 sh3 domain complexed with a peptide from pbs2
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   273......280........ .290.........300.........310.........320........
Predicted Secondary structure 










..












Query SS confidence 















. .







































Query Sequence  VRWARALYDFEALEDD. . ELGFHSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPM
Query Conservation       




 
   
..


   

 
 
      


 
   
  
  
 


 
 
Alig confidence 















..







































Template Conservation 
    

  
     
  



  

 
 
      

      
  
 

  


 
Template Sequence  IYKAKALYPYDADDDDAYEISFEQNEILQVSDIEGRWWKARRANGETGIIPSNYVQLI
Template Known Secondary structure  SS
B


SSSTTB

B
TT

TTSS
TTS
GGG
Template Predicted Secondary structure 




























Template SS confidence 

























































   4.....10.........20.........30.........40.........50.........60.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions