 |
| Job Description | O75791 | | Confidence | 34.62% | Date | Wed May 9 17:39:07 BST 2012 |
| Rank | 310 | Aligned Residues | 34 |
| % Identity | 26% | Template | c2k4kA_ |
| PDB info |
PDB header:rna binding protein | Chain: A: PDB Molecule:general stress protein 13; |
PDBTitle: solution structure of gsp13 from bacillus subtilis
|
| Resolution | UNK |
|
|   |   |
18 | . | 20 | . | . | . | . | . | . | |
|
. | . | . | 30 | . | . | |
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  | . | . |  |  |  |
|
|
| . |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | F | H | T | G | D | V | L | K | . |
. |
I | L | S | N | Q | E | . |
E | W | F | K | A | E | L | G | S | Q | E | G | Y | V | P | K | N | F | I |
| Query Conservation |   |
|
|   |   |
|
|   |
|   | . | . |
|
|   |   |   |
| . |   |
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|   |
|   |   |
|   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |   |   |
|   |
|   |   |   |
|
|
| Template Sequence |   |
K | F | E | V | G | S | V | Y | T | G | K | V | T | G | L | Q | A | Y | G | A | F | V | A | L | D | E | E | T | Q | G | L | V | H | I | S | E | V |
| Template Known Secondary structure |   |
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  | G | G | G | T |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|