 |
| Job Description | O75791 | | Confidence | 99.74% | Date | Wed May 9 17:39:07 BST 2012 |
| Rank | 90 | Aligned Residues | 72 |
| % Identity | 22% | Template | c1x6bA_ |
| PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:rho guanine exchange factor (gef) 16; |
PDBTitle: solution structures of the sh3 domain of human rho guanine2 exchange factor (gef) 16
|
| Resolution | UNK |
|
 |
|   |   |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | |
|
. | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
H | R | R | H | T | D | P | V | Q | L | Q | A | A | G | R | V | R | W | A | R | A | L | Y | D | F | E | A | L | E | D | D | E | L | G | F | H | S | G | E | V | V | E | V | L | D | S | S | N | P | S | W | W | T | G | R | L | . |
. |
H | N | K | L | G | L | F | P | A | N | Y | V | A | P | M | T | R |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |
|
|
|
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |
|
|
|   |
|   |   | . | . |   |
|   |   |
|   |   |
|   |
|
|
|   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |
|   |   |   |
|
|
|
|   |   |   |
|
|   |
|   |
|   |   |   |   |   | . |   |
|
|   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|
|
|
|   |
|   |   |
| Template Sequence |   |
S | S | G | S | S | G | W | Q | G | L | S | S | K | G | D | L | P | Q | V | E | I | T | K | A | F | F | A | K | Q | A | D | E | V | T | L | Q | Q | A | D | V | V | L | V | L | Q | Q | E | D | . |
G | W | L | Y | G | E | R | L | R | D | G | E | T | G | W | F | P | E | D | F | A | R | F | I | S | G |
| Template Known Secondary structure |   |
|
|
|
|
| S |
|
|
|
|
|
|
| S | S |
|
|  |  |  |  | S | S |
|
|
|
|
| S | S | S | B |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  | T | . | T |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |
| G | G | G |
|  |  |  |  | S |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|