Return to main results Retrieve Phyre Job Id

Job DescriptionO75791
Confidence99.72%DateWed May 9 17:39:07 BST 2012
Rank127Aligned Residues58
% Identity28%Templatec1s1nA_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:nephrocystin 1; PDBTitle: sh3 domain of human nephrocystin
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   272.......280.........290.........300.........310.. .......320.........
Predicted Secondary structure 



















.





Query SS confidence 








































.
















Query Sequence  RVRWARALYDFEALEDDELGFHSGEVVEVLDSSNPSWWTGR. LHNKLGLFPANYVAPMT
Query Conservation        




 
   



   

 
 
      


 
 .  
  
  
 


 
  
Alig confidence 








































.
















Template Conservation 

    

 

      


   

 
 

      

         
  
  

    
Template Sequence  TGEEYIAVGDFTAQQVGDLTFKKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEPYS
Template Known Secondary structure 


S
B

SSSS


B
SS
S

SSS
SSS
STT

Template Predicted Secondary structure 



























Template SS confidence 


























































   153......160.........170.........180.........190.........200.........210.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions