Job Description A0PK00 Confidence 36.49% Date Fri May 25 09:38:31 BST 2012 Rank 139 Aligned Residues 91 % Identity 18% Template d1gs9a_ SCOP info Four-helical up-and-down bundle Apolipoprotein Apolipoprotein Resolution 1.7

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	R	C	E	R	E	W	H	E	L	E	G	E	F	Q	E	L	Q	E	T	H	R	I	Y	K	Q	K	L	E	E	L	A	A	L	Q	T	L	C	S	S	S	I	S	K	Q	K	K	H	L	K	D	L	K	L	T	L	Q	R	C	K	R	H	A	S	R	E	E	A	E	L	V	Q	Q	M	A	A	N	I	K
Query Conservation
Alig confidence																														.	.
Template Conservation																														.	.
Template Sequence		M	K	E	L	K	A	Y	K	S	E	L	E	E	Q	L	T	P	V	A	E	E	T	R	A	R	L	S	K	.	.	E	L	Q	A	A	Q	A	R	L	G	A	D	M	E	D	V	R	G	R	L	V	Q	Y	R	G	E	V	Q	A	M	L	G	Q	S	T	E	E	L	R	V	R	L	A	S	H	L	R	K	L	R
Template Known Secondary structure													T	T	S						S									.	.																													T	S	T	T
Template Predicted Secondary structure																														.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		85	.		.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		E	R	.	Q	D	V	F	F	D	M	E	A	Y	L
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		K	R	L	L	R	D	A	D	D	L	Q	K	R	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions