Job Description A0PK00 Confidence 47.06% Date Fri May 25 09:38:31 BST 2012 Rank 115 Aligned Residues 78 % Identity 18% Template c3vbbB_ PDB info PDB header:ligase Chain: B: PDB Molecule:seryl-trna synthetase, cytoplasmic; PDBTitle: crystal structure of seryl-trna synthetase from human at 2.9 angstroms Resolution 2.89 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																								.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	E	G	E	F	Q	E	L	Q	E	T	H	R	I	Y	K	Q	K	L	E	E	L	A	A	L	Q	T	L	C	S	S	S	I	S	K	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	H	L	K	D	L	K	L	T	L	Q	R	C	K	R	H	A	S	R
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		G	L	V	D	Q	L	V	K	A	D	S	E	W	R	R	C	R	F	R	A	D	N	L	N	K	L	K	N	L	C	S	K	T	I	G	E	K	M	K	K	D	E	S	V	P	E	N	V	L	S	F	D	D	L	T	A	D	A	L	A	N	L	K	V	S	Q	I	K	K	V	R	L	L	I	D	.	.	.	.	.
Template Known Secondary structure																																							T	T												S	S	S								T	S														.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	A	E	L	V	Q	Q	M	A	A	N	I	K	E	R	Q	D	V	F	F	D	M	E	A	Y	L	P	K
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	E	A	I	L	K	C	D	A	E	R	I	K	L	E	A	E	R	F	E	N	L	R	E	I	G	N
Template Known Secondary structure		.	.	.																						T	T	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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