Job Description A0PK00 Confidence 41.33% Date Fri May 25 09:38:31 BST 2012 Rank 128 Aligned Residues 172 % Identity 13% Template c3sogA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:amphiphysin; PDBTitle: crystal structure of the bar domain of human amphiphysin, isoform 1 Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50								.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.
Query Sequence		G	Q	L	E	R	C	E	R	E	W	H	E	L	E	G	E	F	Q	E	L	Q	E	T	H	R	I	Y	K	Q	K	L	E	E	L	A	A	L	Q	T	L	C	S	S	S	I	S	K	Q	.	.	.	.	.	.	.	K	K	H	L	K	D	L	K	L	T	L	Q	R	C	K	R	H	A	S	R	E	E	A	E	L
Query Conservation																																																		.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.																.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		E	Q	F	E	E	Y	V	Q	N	F	K	R	Q	E	A	E	G	T	R	L	Q	R	E	L	R	G	Y	L	A	A	I	K	G	M	Q	E	A	S	M	K	L	T	E	S	L	H	E	V	Y	E	P	D	W	Y	G	R	E	D	V	K	M	V	G	E	K	C	D	V	L	W	.	.	.	E	D	F	H	Q	K	L
Template Known Secondary structure																																																	T	T		S			S		S															.	.	.
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																												.	.	.
Query SS confidence																																												.	.	.
Query Sequence		V	Q	Q	M	A	A	N	I	K	E	R	Q	D	V	F	F	D	M	E	A	Y	L	P	K	K	N	G	L	Y	L	N	L	V	L	G	N	V	N	V	T	L	L	.	.	.	S	N	Q	A	K	F	A	Y	K	D	E	Y	E	K	F	K	L	Y	L	T	I	I	L	L	L	G	A	V	A	C	R	F	V	L	H
Query Conservation																																												.	.	.
Alig confidence																																												.	.	.
Template Conservation
Template Sequence		V	D	G	S	L	L	T	L	D	T	Y	L	G	Q	F	P	D	I	K	N	R	I	A	K	R	S	R	K	L	V	D	Y	D	S	A	R	H	H	L	E	A	L	Q	S	K	D	E	S	R	I	S	K	A	E	E	E	F	Q	K	A	Q	K	V	F	E	E	F	N	V	D	L	Q	E	E	L	P	S	L	W	S
Template Known Secondary structure				T										T	T																								G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		153	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.
Query Sequence		Y	R	V	T	.	.	.	.	.	.	D	E	V	F	N	F	L	L	V	W	Y	Y	C	T	L	T	I	R	E	S	I
Query Conservation						.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.
Template Conservation
Template Sequence		R	R	V	G	F	Y	V	N	T	F	K	N	V	S	S	L	E	A	K	F	H	K	E	I	A	V	L	C	H	K	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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