Job Description A0PK00 Confidence 47.30% Date Fri May 25 09:38:31 BST 2012 Rank 114 Aligned Residues 83 % Identity 19% Template c3sfvB_ PDB info PDB header:protein transport/protein binding Chain: B: PDB Molecule:lida protein, substrate of the dot/icm system; PDBTitle: crystal structure of the gdp-bound rab1a s25n mutant in complex with2 the coiled-coil domain of lida from legionella pneumophila Resolution 1.73 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		W	H	E	L	E	G	E	F	Q	E	L	Q	E	T	H	R	I	Y	K	Q	K	L	E	E	L	A	A	L	Q	T	L	C	S	S	.	.	.	.	S	I	S	K	Q	K	K	H	L	K	D	L	K	L	T	L	Q	R	C	K	R	H	A	S	R	E	E	A	E	L	V	Q	Q	M	A	A	N	I	K	E	R	Q
Query Conservation																																				.	.	.	.
Alig confidence																																				.	.	.	.																												.
Template Conservation																																																																			.
Template Sequence		L	D	K	L	E	R	Q	G	K	D	L	E	D	K	Y	K	T	Y	E	E	N	L	E	G	F	E	K	L	L	T	D	S	E	E	L	S	L	S	E	I	N	E	K	M	K	A	F	S	K	D	S	E	K	L	T	Q	L	M	E	K	H	K	G	D	E	.	K	T	V	Q	S	L	Q	R	E	H	H	D	I	K
Template Known Secondary structure																									T																																					T	T	T			.
Template Predicted Secondary structure																																																																			.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.
		88	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	F	F	D	M	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	L	A	N	L	Q	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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