Job Description A0PK00 Confidence 24.19% Date Fri May 25 09:38:31 BST 2012 Rank 210 Aligned Residues 73 % Identity 7% Template c3r84O_ PDB info PDB header:transcription Chain: O: PDB Molecule:mediator of rna polymerase ii transcription subunit 11; PDBTitle: structure of the mediator head subcomplex med11/22 Resolution 2.05 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	I	Y	K	Q	K	L	E	E	L	A	A	L	Q	T	L	C	S	S	S	I	S	K	Q	K	K	H	L	K	D	L	K	L	T	L	Q	R	C	K	R	H	A	S	R	E	E	A	E	L	V	Q	Q	M	A	A	N	I	K	E	R	Q	D	V	F	F	D	M	E	A	Y	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	E	R	L	K	S	L	N	D	I	E	T	Q	L	C	S	X	L	Q	E	A	S	Q	V	T	F	I	F	G	E	L	K	R	G	N	E	S	V	K	P	Q	F	E	N	H	V	K	Q	F	Y	E	R	L	D	K	S	T	T	Q	L	R	K	E	I	Q	L	L	D	E	N	V	G
Template Known Secondary structure																																			T	T		G	G	G																																	T	T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions