Job Description A0PK00 Confidence 27.74% Date Fri May 25 09:38:31 BST 2012 Rank 181 Aligned Residues 92 % Identity 13% Template c3lbxB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:spectrin beta chain, erythrocyte; PDBTitle: crystal structure of the erythrocyte spectrin tetramerization domain2 complex Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		S	G	Q	L	E	R	C	E	R	E	W	H	E	L	E	G	E	F	Q	E	L	Q	E	T	H	R	I	Y	K	Q	K	L	E	E	L	A	A	L	Q	T	L	C	S	S	S	I	S	K	Q	K	K	H	L	K	D	L	K	L	T	L	Q	R	C	K	R	H	A	S	R	E	E	A	E	L	V	Q	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																								.																																						.	.	.	.
Template Conservation																																								.
Template Sequence		H	Q	A	S	E	E	I	R	E	K	L	Q	Q	V	M	S	R	R	K	E	M	N	E	K	W	E	A	R	W	E	R	L	R	M	L	L	E	V	.	C	Q	F	S	R	D	A	S	V	A	E	A	W	L	I	A	Q	E	P	Y	L	A	S	G	D	F	G	H	T	V	D	S	V	E	K	L	I	K	R	H	E
Template Known Secondary structure			T	T																																				.																												S	S
Template Predicted Secondary structure																																								.
Template SS confidence
		1974	.	.	.	.	.	1980	.	.	.	.	.	.	.	.	.	1990	.	.	.	.	.	.	.	.	.	2000	.	.	.	.	.	.	.	.	.	2010	.		.	.	.	.	.	.	.	.	2020	.	.	.	.	.	.	.	.	.	2030	.	.	.	.	.	.	.	.	.	2040	.	.	.	.	.	.	.	.	.	2050	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	A	A	N	I	K	E	R	Q	D	V	F	F	D	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	E	K	S	T	A	S	W	A	E	R	F	A	A	L	E
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		2053	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions