Job Description A0PK00 Confidence 71.32% Date Fri May 25 09:38:31 BST 2012 Rank 87 Aligned Residues 78 % Identity 12% Template c3errB_ PDB info PDB header:ligase Chain: B: PDB Molecule:fusion protein of microtubule binding domain from PDBTitle: microtubule binding domain from mouse cytoplasmic dynein as2 a fusion with seryl-trna synthetase Resolution 2.27 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		Q	L	E	R	C	E	R	E	W	H	E	L	E	G	E	F	Q	E	L	Q	.	.	E	T	H	R	I	Y	K	Q	K	L	E	E	L	A	A	L	Q	T	L	C	S	S	S	I	S	K	Q	K	K	H	L	K	D	L	K	L	T	L	Q	R	C	K	R	H	A	S	R	E	E	A	E	L	V	Q	Q	M	A	A
Query Conservation																						.	.
Alig confidence																						.	.
Template Conservation
Template Sequence		D	L	K	R	L	R	Q	E	P	E	V	F	H	R	A	I	R	E	K	G	V	A	L	D	L	E	A	L	L	A	V	D	E	Q	L	H	K	Q	Q	E	V	I	A	D	K	Q	M	S	V	K	E	D	L	D	K	V	E	P	A	V	I	E	A	Q	N	A	V	K	S	I	K	K	Q	H	L	V	E	V	R	S
Template Known Secondary structure										T	T										T																																																	T	S		T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions