Job Description A0PK00 Confidence 49.86% Date Fri May 25 09:38:31 BST 2012 Rank 108 Aligned Residues 101 % Identity 20% Template c3d5cX_ PDB info PDB header:ribosome Chain: X: PDB Molecule:peptide chain release factor 1; PDBTitle: structural basis for translation termination on the 70s ribosome. this2 file contains the 30s subunit, release factor 1 (rf1), two trna, and3 mrna molecules of the second 70s ribosome. the entire crystal4 structure contains two 70s ribosomes as described in remark 400. Resolution 3.21 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30						.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.
Predicted Secondary structure																							.	.	.	.	.																																															.
Query SS confidence																							.	.	.	.	.																																															.
Query Sequence		R	E	W	H	E	L	E	G	E	F	Q	E	L	Q	E	T	H	R	I	Y	K	.	.	.	.	.	Q	K	L	E	E	L	A	A	L	Q	T	L	C	S	S	S	I	S	K	Q	K	K	H	L	K	D	L	K	L	T	L	Q	R	C	K	R	H	A	S	R	E	E	A	E	L	V	.	Q	Q	M	A	A	N	I
Query Conservation																							.	.	.	.	.																																															.
Alig confidence																							.	.	.	.	.																																															.
Template Conservation
Template Sequence		D	K	L	D	R	L	E	E	E	Y	R	E	L	E	A	L	L	S	D	P	E	V	L	K	D	K	G	R	Y	Q	S	L	S	R	R	Y	A	E	M	G	E	V	I	G	L	I	R	E	Y	R	K	V	L	E	D	L	E	Q	A	E	S	L	L	D	D	P	E	L	K	E	M	A	K	A	E	R	E	A	L	L
Template Known Secondary structure								T										T	T	S	T	T	T	T	S																																					T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		84	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure													.						.	.	.	.
Query SS confidence													.						.	.	.	.
Query Sequence		K	E	R	Q	D	V	F	F	D	M	E	.	A	Y	L	P	K	.	.	.	.	K	N	G	L	Y	L	N	L	V	L	G
Query Conservation													.						.	.	.	.
Alig confidence													.						.	.	.	.
Template Conservation
Template Sequence		A	R	K	E	A	L	E	K	E	L	E	R	H	L	L	P	K	D	P	M	D	E	R	D	A	I	V	E	I	R	A	G
Template Known Secondary structure																S	T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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