Job Description A0PK00 Confidence 38.87% Date Fri May 25 09:38:31 BST 2012 Rank 134 Aligned Residues 94 % Identity 15% Template c3c98B_ PDB info PDB header:endocytosis/exocytosis Chain: B: PDB Molecule:syntaxin-1a; PDBTitle: revised structure of the munc18a-syntaxin1 complex Resolution 2.60 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.								.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																												.	.	.	.	.	.	.																																											.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.																																											.	.	.	.	.
Query Sequence		G	Q	L	E	R	C	E	R	E	W	H	E	L	E	G	E	F	Q	E	L	Q	E	T	H	R	I	.	.	.	.	.	.	.	Y	K	Q	K	L	E	E	L	A	A	L	Q	T	L	C	S	S	S	I	S	K	Q	K	K	H	L	K	D	L	K	L	T	L	Q	R	C	K	R	H	A	S	R	.	.	.	.	.
Query Conservation																												.	.	.	.	.	.	.																																											.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.																																											.	.	.	.	.
Template Conservation
Template Sequence		E	Q	V	E	E	I	R	G	F	I	D	K	I	A	E	N	V	E	E	V	K	R	K	H	S	A	I	L	A	S	P	N	P	D	E	K	T	K	E	E	L	E	E	L	M	S	D	I	K	K	T	A	N	K	V	R	S	K	L	K	S	I	E	Q	S	I	E	Q	E	E	G	L	N	R	S	S	A	D	L	R
Template Known Secondary structure																														T		S	S			S																																				T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	A	E	L	V	Q	Q	M	A	A	N	I	K	E	R	Q	D	V	F	F	D	M	E	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	K	T	Q	H	S	T	L	S	R	K	F	V	E	V	M	S	E	Y	N	A	T	Q	S	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions