 |
| Job Description | A0PK00 | | Confidence | 77.70% | Date | Fri May 25 09:38:31 BST 2012 |
| Rank | 72 | Aligned Residues | 94 |
| % Identity | 12% | Template | c2v1yB_ |
| PDB info |
PDB header:transferase | Chain: B: PDB Molecule:phosphatidylinositol 3-kinase regulatory subunit alpha; |
PDBTitle: structure of a phosphoinositide 3-kinase alpha adaptor-2 binding domain (abd) in a complex with the ish2 domain3 from p85 alpha
|
| Resolution | 2.4 Å |
|
 |
|   |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 70 | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | Q | L | E | R | C | E | R | E | W | H | E | L | E | G | E | F | Q | E | L | Q | E | T | H | R | I | Y | K | Q | K | L | E | E | L | A | A | L | Q | T | L | C | S | S | S | I | S | K | Q | K | K | H | L | K | D | L | K | L | T | L | Q | R | C | K | R | . |
. |
. |
. |
. |
. |
. |
. |
H | A | S | R | E | E | A | E |
| Query Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |
|
|
|
|   |
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|   | . | . | . | . | . | . | . | . |
|   |
|   |
|
|   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |
|
|   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
| Template Sequence |   |
D | N | I | E | A | V | G | K | K | L | H | K | Y | N | T | Q | F | Q | E | K | S | R | E | Y | D | R | L | Y | E | E | Y | T | R | T | S | Q | E | I | Q | X | K | R | T | A | I | E | A | F | N | E | T | I | K | I | F | E | E | Q | C | Q | T | Q | E | R | Y | S | K | E | Y | I | E | K | F | K | R | E | G | N | E | K |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . |
|   |
|   |   |
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | V | Q | Q | M | A | A | N | I | K | E | R | Q | D | V | F | F | D | M | E | A | Y |
| Query Conservation |   |
|
|
|
|
|
|
|   |
|   |
|
|
|   |   |
|
|
|
|
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |   |
| Template Sequence |   |
E | I | Q | R | I | X | H | N | Y | D | K | L | K | S | R | I | S | E | I | I | D | S |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|