Job Description A0PK00 Confidence 33.45% Date Fri May 25 09:38:31 BST 2012 Rank 151 Aligned Residues 61 % Identity 11% Template c1z56B_ PDB info PDB header:ligase Chain: B: PDB Molecule:ligase interacting factor 1; PDBTitle: co-crystal structure of lif1p-lig4p Resolution 3.92 Å

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Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		S	G	Q	L	E	R	C	E	R	E	W	H	E	L	E	G	E	F	Q	E	L	Q	E	T	H	R	I	Y	K	Q	K	L	E	E	L	A	A	L	Q	T	L	.	C	S	S	S	I	S	K	Q	K	K	H	L	K	D	L	K	L	T	L	Q
Query Conservation																																											.
Alig confidence																																											.
Template Conservation
Template Sequence		N	D	S	Y	R	N	I	K	E	S	D	S	S	N	R	N	R	V	E	Q	L	A	R	E	R	E	L	L	D	K	L	L	E	T	R	D	E	R	T	R	A	M	M	V	T	L	L	N	E	K	K	K	K	I	R	E	L	H	E	I	L	R
Template Known Secondary structure													S														T	T	T					T																										T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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