Job Description A0PK00 Confidence 87.00% Date Fri May 25 09:38:31 BST 2012 Rank 52 Aligned Residues 91 % Identity 9% Template c1m1jA_ PDB info PDB header:blood clotting Chain: A: PDB Molecule:fibrinogen alpha subunit; PDBTitle: crystal structure of native chicken fibrinogen with two different2 bound ligands Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		R	C	E	R	E	W	H	E	L	E	G	E	F	Q	E	L	Q	E	T	H	R	I	Y	K	Q	K	L	E	E	L	A	A	L	Q	T	L	C	S	S	S	I	S	K	Q	K	K	H	L	K	D	L	K	L	T	L	Q	R	C	K	R	H	A	S	R	.	.	.	E	E	A	E	L	V	Q	Q	M	A	A	N	I
Query Conservation																																																																		.	.	.
Alig confidence																																																																		.	.	.
Template Conservation
Template Sequence		N	Y	S	Q	R	I	D	N	I	R	Q	Q	L	A	D	S	Q	N	K	Y	K	T	S	N	R	V	I	V	E	T	I	N	I	L	K	P	G	L	E	G	A	Q	Q	L	D	E	N	Y	G	H	V	S	T	E	L	R	R	R	I	V	T	L	K	Q	R	V	A	T	Q	V	N	R	I	K	A	L	Q	N	S	I
Template Known Secondary structure																				T	T	T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	R	Q	D	V	F	F	D	M	E	A	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	E	Q	V	V	E	M	K	R	L	E	V	D	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions