Job Description A0PK00 Confidence 93.63% Date Fri May 25 09:38:31 BST 2012 Rank 32 Aligned Residues 83 % Identity 19% Template c1l8dB_ PDB info PDB header:replication Chain: B: PDB Molecule:dna double-strand break repair rad50 atpase; PDBTitle: rad50 coiled-coil zn hook Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	S	G	Q	L	E	R	C	E	R	E	W	H	E	L	E	G	E	F	Q	E	L	Q	E	T	H	R	I	Y	K	Q	K	L	E	E	L	A	A	L	Q	T	L	C	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	I	S	K	Q	K	K	H	L	K	D	L	K	L	T	L
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	K	L	L	E	E	L	E	T	K	K	T	T	I	E	E	E	R	N	E	I	T	Q	R	I	G	E	L	K	N	K	I	G	D	L	K	T	A	I	E	E	L	K	K	A	K	G	K	C	P	V	C	G	R	E	L	T	D	E	H	R	E	E	L	L	S	K	Y	H	L	D	L	N	N	S	K	N	T	L
Template Known Secondary structure																																													T	T		S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	C	K	R	H	A	S	R	E	E	A	E	L	V	Q	Q	M	A	A	N	I	K	E	R	Q	D	V	F	F
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.
Template Sequence		A	K	L	I	.	.	.	.	.	.	.	.	D	R	K	S	E	L	E	R	E	L	R	R	I	D	M	E	I	K
Template Known Secondary structure						.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.
Template SS confidence
		475	.	.	.									.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions