 |
| Job Description | A0PK00 | | Confidence | 91.24% | Date | Fri May 25 09:38:31 BST 2012 |
| Rank | 39 | Aligned Residues | 94 |
| % Identity | 15% | Template | c1jchC_ |
| PDB info |
PDB header:ribosome inhibitor, hydrolase | Chain: C: PDB Molecule:colicin e3; |
PDBTitle: crystal structure of colicin e3 in complex with its immunity protein
|
| Resolution | 3.02 Å |
|
 |
|   |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
. | . | . | . | . | . | . | . | . | 80 |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
Q | L | E | R | C | E | R | E | W | H | E | L | E | G | E | F | Q | E | L | Q | E | T | H | R | I | Y | K | Q | K | L | E | E | L | A | A | L | Q | T | L | C | S | S | S | I | S | K | Q | K | K | H | L | K | D | L | K | L | T | L | Q | R | C | K | R | H | A | S | R | . |
. |
. |
E | E | A | E | L | V | Q | Q | M | A |
| Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |   |
|
|
|
|   |
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|   |
|   | . | . | . |
|
|   |
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |
|   |
|
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
P | V | E | A | A | E | R | N | Y | E | R | A | R | A | E | L | N | Q | A | N | E | D | V | A | R | N | Q | E | R | Q | A | K | A | V | Q | V | Y | N | S | R | K | S | E | L | D | A | A | N | K | T | L | A | D | A | I | A | E | I | K | Q | F | N | R | F | A | H | D | P | M | A | G | G | H | R | M | W | Q | M | A | G |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | G | G | G | T | T |
| S | S | S | S |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
315 | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . |
|   |
|   |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
A | N | I | K | E | R | Q | D | V | F | F | D | M | E | A | Y | L |
| Query Conservation |   |
|   |
|   |
|
|
|   |   |
|
|
|
|
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| Template Sequence |   |
L | K | A | Q | R | A | Q | T | D | V | N | N | K | Q | A | A | F |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
395 | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|