Job Description A0PK00 Confidence 81.90% Date Fri May 25 09:38:31 BST 2012 Rank 65 Aligned Residues 96 % Identity 7% Template c1hciB_ PDB info PDB header:triple-helix coiled coil Chain: B: PDB Molecule:alpha-actinin 2; PDBTitle: crystal structure of the rod domain of alpha-actinin Resolution 2.8 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.
Query SS confidence																																																																								.	.	.
Query Sequence		M	S	G	Q	L	E	R	C	E	R	E	W	H	E	L	E	G	E	F	Q	E	L	Q	E	T	H	R	I	Y	K	Q	K	L	E	E	L	A	A	L	Q	T	L	C	S	S	S	I	S	K	Q	K	K	H	L	K	D	L	K	L	T	L	Q	R	C	K	R	H	A	S	R	.	.	.	E	E	A	E	L	V	Q
Query Conservation																																																																								.	.	.
Alig confidence																																																																								.	.	.
Template Conservation
Template Sequence		S	T	V	T	M	D	E	L	R	T	K	W	D	K	V	K	Q	L	V	P	I	R	D	Q	S	L	Q	E	E	L	A	R	Q	H	A	N	E	R	L	R	R	Q	F	A	A	Q	A	N	A	I	G	P	W	I	Q	N	K	M	E	E	I	A	R	S	S	I	Q	I	T	G	A	L	E	D	Q	M	N	Q	L	K
Template Known Secondary structure			S	S																																																												S		S		T	T	T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	M	A	A	N	I	K	E	R	Q	D	V	F	F	D	M	E	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Y	E	H	N	I	I	N	Y	K	N	N	I	D	K	L	E	G	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions