Job Description Q96IW2 Confidence 99.73% Date Sat Jun 16 10:30:30 BST 2012 Rank 96 Aligned Residues 80 % Identity 16% Template c3or8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: a tandem sh2 domain in transcription elongation factor spt6 Resolution 1.60 Å

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		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.							.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.										.	.	.	.	.	.
Query SS confidence																																																			.										.	.	.	.	.	.
Query Sequence		K	Q	P	W	F	H	G	P	L	N	R	A	D	A	E	S	L	L	S	L	C	K	E	G	S	Y	L	V	R	L	S	E	T	N	P	Q	D	C	S	L	S	L	R	S	S	Q	G	F	L	.	H	L	K	F	A	R	T	R	E	.	.	.	.	.	.	N	Q	V	V	L	G	Q	H	S	G	P	F	P	S	V
Query Conservation																																																			.										.	.	.	.	.	.
Alig confidence								.																																											.										.	.	.	.	.	.									.
Template Conservation								.																																																																			.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	L	E	K	E	N	P	L	A	L	G	K	V	L	V	V	E	G	.	Q	R	Y	H	D	L
Template Known Secondary structure				T	T			.												T	T	S		T	T								S	S		T	T										T	T											S		S	S	T	T	S			S					T	T	.				S	S
Template Predicted Secondary structure								.																																																																			.
Template SS confidence
		5	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.
		310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	L	V	L	H	Y	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Q	I	I	V	E	Y	L	Q
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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