Job Description Q96IW2 Confidence 99.84% Date Sat Jun 16 10:30:30 BST 2012 Rank 88 Aligned Residues 87 % Identity 15% Template c3gxxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:transcription elongation factor spt6; PDBTitle: structure of the sh2 domain of the candida glabrata2 transcription elongation factor spt6, crystal form b Resolution 2.40 Å

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		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																														.												.	.
Query SS confidence																																														.												.	.
Query Sequence		K	Q	P	W	F	H	G	P	L	N	R	A	D	A	E	S	L	L	S	L	C	K	E	G	S	Y	L	V	R	L	S	E	T	N	P	Q	D	C	S	L	S	L	R	S	.	S	Q	G	F	L	H	L	K	F	A	R	.	.	T	R	E	N	Q	V	V	L	G	Q	H	S	G	P	F	P	S	V	P	E	L	V
Query Conservation																																														.												.	.
Alig confidence								.																																						.												.	.												.
Template Conservation								.																																																															.
Template Sequence		N	H	P	Y	Y	F	.	P	F	N	G	K	Q	A	E	D	Y	L	R	S	K	E	R	G	D	F	V	I	R	Q	S	S	R	G	D	D	H	L	A	I	T	W	K	L	D	K	D	L	F	Q	H	V	D	I	Q	E	X	E	K	E	X	G	K	V	L	V	V	E	G	.	Q	R	Y	H	D	L	D	Q	I	I
Template Known Secondary structure		T		T	T	B		.												T	T	S		T	T									S	T	T											T	T																				S	S	S	.				S	S
Template Predicted Secondary structure								.																																																															.
Template SS confidence
		9	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	Y	S	S	R	P	L	P	V	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	Y	L	Q	N	K	I	R	L	L	N
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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