Job Description Q5HYK7 Confidence 99.57% Date Sat Jun 16 10:27:40 BST 2012 Rank 187 Aligned Residues 55 % Identity 33% Template c3rebD_ PDB info PDB header:protein binding Chain: D: PDB Molecule:tyrosine-protein kinase hck; PDBTitle: hiv-1 nef protein in complex with engineered hck-sh3 domain Resolution 3.45 Å

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		734	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.		.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		K	A	K	A	L	Y	D	F	R	G	E	N	E	D	E	L	S	F	K	A	G	D	I	I	T	E	L	E	S	V	D	D	D	W	M	S	G	E	.	L	M	G	K	S	G	I	F	P	K	N	Y	I	Q	F	L	Q
Query Conservation																																								.
Alig confidence																																								.
Template Conservation
Template Sequence		I	V	V	A	L	Y	D	Y	V	S	W	S	P	D	D	L	S	F	Q	K	G	D	Q	M	V	V	L	E	E	S	G	E	W	W	K	A	R	S	L	A	T	R	K	E	G	Y	I	P	S	N	Y	V	A	R	V	D
Template Known Secondary structure						S	S		B			S	S	T	T	B			B		T	T									S	S	S							T	T	T								G	G	G
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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