Job Description Q5HYK7 Confidence 99.65% Date Sat Jun 16 10:27:40 BST 2012 Rank 137 Aligned Residues 66 % Identity 26% Template c2enmA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:sorting nexin-9; PDBTitle: solution structure of the sh3 domain from mouse sorting2 nexin-9 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.		.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.			.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790
Predicted Secondary structure																						.																													.	.
Query SS confidence																						.																													.	.
Query Sequence		M	L	A	I	V	P	K	G	R	K	A	K	A	L	Y	D	F	R	G	E	.	N	E	D	E	L	S	F	K	A	G	D	I	I	T	E	L	E	S	V	D	D	D	W	M	S	G	E	L	.	.	M	G	K	S	G	I	F	P	K	N	Y	I	Q	F	L	Q	I	S
Query Conservation																						.																													.	.
Alig confidence																						.																													.	.
Template Conservation
Template Sequence		S	S	G	S	S	G	M	A	T	K	A	R	V	M	Y	D	F	A	A	E	P	G	N	N	E	L	T	V	T	E	G	E	I	I	T	V	T	N	P	N	V	G	G	G	W	L	E	G	K	N	N	K	G	E	Q	G	L	V	P	T	D	Y	V	E	I	L	P	N	D
Template Known Secondary structure					S	S		S							S	S						T	T	S	S	B					T	T								S			S	S	S							T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions