Return to main results Retrieve Phyre Job Id

Job DescriptionQ5HYK7
Confidence99.70%DateSat Jun 16 10:27:40 BST 2012
Rank61Aligned Residues72
% Identity31%Templatec2csqA_
PDB info PDB header:endocytosis/exocytosisChain: A: PDB Molecule:rim binding protein 2; PDBTitle: solution structure of the second sh3 domain of human rim-2 binding protein 2
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   719720.........730.........740..... ....750.........760...... ...770.........780.........
Predicted Secondary structure 





















........














.






Query SS confidence 


























. . . . . . . .




















.






















Query Sequence  PAEAKSMLAIVPKGRKAKALYDFRGEN. . . . . . . . EDELSFKAGDIITELESVDDD. WMSGELMGKSGIFPKNYIQFLQI
Query Conservation                    

  
    ........  

    

 
 
  
   
.
  
   
  
 

  

     
Alig confidence 


























........




















.






















Template Conservation    
   
     
     




              



  

 
 
        
      
  
 

 


     
Template Sequence  GSSGTDPGAEELPARIFVALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGETCARLGLIPCNMVSEIQA
Template Known Secondary structure  SSSSS


S





SS
B
TTTTSS
TTB

B
TT

TT
TTTTTS


Template Predicted Secondary structure 
















































Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   790
Predicted Secondary structure 
Query SS confidence 
Query Sequence  S
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  D
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   84
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions