Job Description Q5TCZ1 Confidence 98.69% Date Sat Jun 16 10:24:30 BST 2012 Rank 228 Aligned Residues 98 % Identity 29% Template c3p0cA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:nischarin; PDBTitle: nischarin px-domain Resolution 2.27 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	V	E	K	R	R	N	P	S	K	H	Y	V	Y	I	I	N	V	T	W	S	D	S	T	S	Q	T	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	L	L	D	K	F	P	I	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V
Query Conservation
Alig confidence																						.																														.	.	.	.	.	.	.	.	.	.														.
Template Conservation																						.																														.	.	.	.	.	.	.	.	.	.														.
Template Sequence		A	R	V	V	G	S	E	L	V	D	T	Y	T	V	Y	I	I	Q	V	T	.	D	G	S	H	E	W	T	V	K	H	R	Y	S	D	F	H	D	L	H	E	K	L	V	A	E	R	K	I	D	.	.	.	.	.	.	.	.	.	.	K	N	L	L	P	P	K	K	I	I	G	K	N	.	S	R	S	L	V	E
Template Known Secondary structure										S	S	S	S									.		S	S																						T	T	S	S		.	.	.	.	.	.	.	.	.	.	T	T	S								S			.		S		S
Template Predicted Secondary structure																						.																														.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.											.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	L	K	P	I	D	E	Y	C	R	A	L	V	R	L	P	P	H	I	S	Q	C	D	E	V	F	R	F	F	E
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		K	R	E	K	D	L	E	V	Y	L	Q	K	L	L	.	A	A	F	P	G	V	T	P	R	V	L	A	H	F	L	H
Template Known Secondary structure																.		T	S		S
Template Predicted Secondary structure																.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions