Job Description Q5TCZ1 Confidence 99.03% Date Sat Jun 16 10:24:30 BST 2012 Rank 224 Aligned Residues 108 % Identity 27% Template c3iq2B_ PDB info PDB header:protein transport Chain: B: PDB Molecule:sorting nexin-7; PDBTitle: human sorting nexin 7, phox homology (px) domain Resolution 1.70 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																			.							.	.	.	.
Query SS confidence																			.							.	.	.	.
Query Sequence		A	T	V	V	D	V	E	K	R	R	N	P	S	K	H	Y	V	.	Y	I	I	N	V	T	.	.	.	.	W	S	D	S	T	S	Q	T	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	L	L	D	K	F	P	I	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	L	P	G	K	I	L	F	R	R
Query Conservation																			.							.	.	.	.
Alig confidence																			.							.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.
Template Sequence		I	T	V	D	E	P	E	S	H	V	T	T	I	E	T	F	I	T	Y	R	I	I	T	K	T	S	R	G	E	F	D	S	S	E	F	E	V	R	R	R	Y	Q	D	F	L	W	L	K	G	K	L	E	E	A	H	P	.	.	.	.	.	.	.	.	.	T	L	I	I	P	P	L	P	E	K	F	M	V	E	R
Template Known Secondary structure													S	S												S		S	S	S	S	S																									T	.	.	.	.	.	.	.	.	.	T	S												G	G
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.										90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	I	R	D	V	A	V	K	R	L	K	P	I	D	E	Y	C	R	A	L	V	R	L	P	P	H	I	S	Q	C	D	E	V	F	R	F	F	E	A	R	P	E	D
Query Conservation
Alig confidence			.																									.
Template Conservation			.																									.
Template Sequence		F	.	N	D	D	F	I	E	T	R	R	K	A	L	H	K	F	L	N	R	I	A	D	H	P	T	.	L	T	F	N	E	D	F	K	I	F	L	T	A	Q	A	W	E
Template Known Secondary structure		G	.																					T	S	T	T	.	G	G	G										T	T		B
Template Predicted Secondary structure			.																									.
Template SS confidence
		109		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions