Job Description Q5TCZ1 Confidence 98.56% Date Sat Jun 16 10:24:30 BST 2012 Rank 230 Aligned Residues 91 % Identity 23% Template c3fogA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:sorting nexin-17; PDBTitle: crystal structure of the px domain of sorting nexin-172 (snx17) Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	H	Y	V	Y	I	I	N	V	T	W	S	D	S	T	S	Q	T	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	L	L	D	K	F	P	I	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	A	V	K	R	L	K	P	I	D	E	Y
Query Conservation
Alig confidence												.	.	.	.																										.	.	.	.	.	.	.	.	.																	.	.
Template Conservation												.	.	.	.																										.	.	.	.	.	.	.	.	.																	.	.
Template Sequence		R	A	Y	V	A	Y	N	I	H	V	.	.	.	.	N	G	V	L	H	C	R	V	R	Y	S	Q	L	L	G	L	H	E	Q	L	R	K	E	Y	G	.	.	.	.	.	.	.	.	.	A	N	V	L	P	A	F	P	P	K	K	L	F	S	L	T	.	.	P	A	E	V	E	Q	R	R	E	Q	L	E	K	Y
Template Known Secondary structure												.	.	.	.	T	T																								.	.	.	.	.	.	.	.	.	T	T	T	S								S	S				.	.
Template Predicted Secondary structure												.	.	.	.																										.	.	.	.	.	.	.	.	.																	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20					.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.										.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	R	A	L	V	R	L	P	P	H	I	S	Q	C	D	E	V	F	R	F	F	E	A	R	P	E	D
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		M	Q	A	V	R	Q	D	P	L	.	L	G	S	S	E	T	F	N	S	F	L	R	R	A	Q	Q	E
Template Known Secondary structure											.			T
Template Predicted Secondary structure											.
Template SS confidence
		83	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions