Job Description Q5TCZ1 Confidence 98.13% Date Sat Jun 16 10:24:30 BST 2012 Rank 241 Aligned Residues 146 % Identity 10% Template c2vrwB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:proto-oncogene vav; PDBTitle: critical structural role for the ph and c1 domains of the2 vav1 exchange factor Resolution 1.85 Å

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		20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.							.
Predicted Secondary structure								.																																.	.	.	.	.																			.												.	.	.	.	.	.
Query SS confidence								.																																.	.	.	.	.																			.												.	.	.	.	.	.
Query Sequence		P	S	K	H	Y	V	.	Y	I	I	N	V	T	W	S	D	S	T	S	Q	T	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	L	L	D	.	.	.	.	.	K	F	P	I	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	.	L	P	G	K	I	L	F	R	R	S	H	.	.	.	.	.	.	I
Query Conservation								.																																.	.	.	.	.																			.												.	.	.	.	.	.
Alig confidence								.																																.	.	.	.	.																			.												.	.	.	.	.	.
Template Conservation
Template Sequence		R	F	L	V	Y	G	R	Y	C	S	Q	V	E	S	A	S	K	H	L	D	Q	V	A	T	A	R	E	D	V	Q	M	K	L	E	E	C	S	Q	R	A	N	N	G	R	F	T	L	R	D	L	L	M	V	P	M	Q	R	V	L	K	Y	H	L	L	L	Q	E	L	V	K	H	T	Q	D	A	T	E	K	E	N
Template Known Secondary structure		G	G	G																																							T	T	S							T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	V	A	V	K	R	L	K	P	I	D	E	Y	C	R	A	L	V	R	L	P	P	H	I	S	Q	C	D	E	V	F	R	F	F	E	A	R	P	E	D	V	N	P	P	K	E	D	Y	G	S	S	K	R	K	S	V	W	L	S	S	W	A	E	S	P	K	K	D	V	T	G	A	D	A	T	A	E	P	M
Query Conservation
Alig confidence																																													.	.	.													.	.	.	.	.	.	.
Template Conservation																																													.	.	.													.	.	.	.	.	.	.
Template Sequence		L	R	L	A	L	D	A	M	R	D	L	A	Q	C	V	N	E	V	K	R	D	N	E	T	L	R	Q	I	T	N	F	Q	L	S	I	E	N	L	D	Q	S	L	A	.	.	.	N	Y	G	R	P	K	I	D	G	E	L	K	.	.	.	.	.	.	.	I	T	S	V	E	R	R	S	K	T	D	R	Y	A	F
Template Known Secondary structure																																						S		S	S		G	G	.	.	.	G	G		S									.	.	.	.	.	.	.				S	S			S
Template Predicted Secondary structure																																													.	.	.													.	.	.	.	.	.	.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.				.	400	.	.	.	.	.	.	.	.	.	410								.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
		167	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	E	Q	Y	V	V	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	D	K	A	L	L	I	C
Template Known Secondary structure				S	S
Template Predicted Secondary structure
Template SS confidence
		426	.	.	.	430	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions