Job Description Q5TCZ1 Confidence 98.26% Date Sat Jun 16 10:24:30 BST 2012 Rank 238 Aligned Residues 109 % Identity 29% Template c2rajA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:sorting nexin-9; PDBTitle: so4 bound px-bar membrane remodeling unit of sorting nexin 9 Resolution 2.45 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		D	A	T	V	V	D	V	E	K	R	R	N	P	S	K	H	Y	V	Y	I	I	N	V	T	W	S	D	S	T	S	Q	T	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	L	L	D	K	F	P	I	E	G	G	Q	K	D	P	K	Q	R	I	.	I	P	F	L	P	G	K	I	L	F	R	R	S	H	I
Query Conservation																																																																		.
Alig confidence																																																						.	.	.	.	.	.	.	.	.				.														.
Template Conservation																																																						.	.	.	.	.	.	.	.	.																		.
Template Sequence		D	C	V	V	A	D	P	R	K	G	S	K	M	Y	G	L	K	S	Y	I	E	Y	Q	L	T	P	T	N	T	N	R	S	V	N	H	R	Y	K	H	F	D	W	L	Y	E	R	L	L	V	K	F	G	.	.	.	.	.	.	.	.	.	S	A	I	P	I	P	S	L	P	D	K	Q	V	T	G	R	F	.	E
Template Known Secondary structure													S	S			S											T	T	T																							T	.	.	.	.	.	.	.	.	.	T	T	S											T	T		S	.	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.										.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	V	A	V	K	R	L	K	P	I	D	E	Y	C	R	A	L	V	R	L	P	P	H	I	S	Q	C	D	E	V	F	R	F	F	E	A	R	P	E	D
Query Conservation
Alig confidence																									.
Template Conservation																									.
Template Sequence		E	E	F	I	K	M	R	M	E	R	L	Q	A	W	M	T	R	M	C	R	H	P	V	.	I	S	E	S	E	V	F	Q	Q	F	L	N	F	R	D	E	K
Template Known Secondary structure																					T		T	T	.	G	G	G	S								S			S
Template Predicted Secondary structure																									.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions