Job Description Q5TCZ1 Confidence 99.90% Date Sat Jun 16 10:24:30 BST 2012 Rank 10 Aligned Residues 187 % Identity 14% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		945	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	P	P	I	P	S	K	P	P	G	G	F	G	K	T	S	G	T	P	A	V	K	M	R	N	G	V	R	Q	V	A	V	R	P	Q	S	V	F	V	S	P	P	P	K	D	N	N	L	S	C	A	L	R	R	N	E	S	L	T	A	T	D	G	L	R	G	V	R	R	N	S	S	F	S	T	A	R	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	H	E	P	E	P	A	G	G	A	T	P	G	A	T	L	P	K	S	P	S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E	A	S	E	V	A	G	G	T	Q	P	A	A
Template Known Secondary structure																								S										S																																										S	S
Template Predicted Secondary structure
Template SS confidence
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		1025	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.		.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.
Predicted Secondary structure																																																															.																	.	.
Query SS confidence																																																															.																	.	.
Query Sequence		A	A	E	A	K	G	R	L	A	E	R	A	A	S	Q	G	S	D	S	P	L	L	P	A	Q	R	N	S	I	P	V	S	P	V	R	P	K	P	I	E	K	S	Q	F	I	H	N	N	L	K	D	V	Y	V	S	I	A	D	Y	E	G	.	D	E	E	T	A	G	F	Q	E	G	V	S	M	E	V	L	.	.
Query Conservation																																																															.																	.	.
Alig confidence																																																															.																	.	.
Template Conservation
Template Sequence		G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	D	T	D	E	L	Q	L	K	A	G	D	V	V	L	V	I	P	F
Template Known Secondary structure																																												S	S			T	T								S	S		B				S	T	T				B		S	S
Template Predicted Secondary structure
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
					1102	.	.	.	.	.	.	.	1110	.	.	.	.	.							.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.
Predicted Secondary structure		.	.	.															.	.	.	.	.	.
Query SS confidence		.	.	.															.	.	.	.	.	.
Query Sequence		.	.	.	E	R	N	P	N	G	W	W	Y	C	Q	I	L	D	.	.	.	.	.	.	G	V	K	P	F	K	G	W	V	P	S	N	Y	L	E	K
Query Conservation		.	.	.															.	.	.	.	.	.
Alig confidence		.	.	.															.	.	.	.	.	.
Template Conservation
Template Sequence		Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E	R
Template Known Secondary structure		S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		442	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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