Job Description Q5TCZ1 Confidence 98.03% Date Sat Jun 16 10:24:30 BST 2012 Rank 245 Aligned Residues 152 % Identity 14% Template c1foeA_ PDB info PDB header:signaling protein, immune system/signali Chain: A: PDB Molecule:t-lymphoma invasion and metastasis inducing PDBTitle: crystal structure of rac1 in complex with the guanine2 nucleotide exchange region of tiam1 Resolution 2.80 Å

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		21	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.																															.	.	.	.																				.																.	.	.	.	.
Query SS confidence							.																															.	.	.	.																				.																.	.	.	.	.
Query Sequence		S	K	H	Y	V	.	Y	I	I	N	V	T	W	S	D	S	T	S	Q	T	I	Y	R	R	Y	S	K	F	F	D	L	Q	M	Q	L	L	.	.	.	.	D	K	F	P	I	E	G	G	Q	K	D	P	K	Q	R	I	I	P	F	.	L	P	G	K	I	L	F	R	R	S	H	I	R	D	V	.	.	.	.	.
Query Conservation							.																															.	.	.	.																				.																.	.	.	.	.
Alig confidence							.																.															.	.	.	.																				.																.	.	.	.	.
Template Conservation																							.
Template Sequence		F	K	L	Y	S	A	F	C	A	S	H	T	K	V	P	K	V	L	V	K	A	.	K	T	D	T	A	F	K	A	F	L	D	A	Q	N	P	R	Q	Q	H	S	S	T	L	E	S	Y	L	I	K	P	I	Q	R	V	L	K	Y	P	L	L	L	R	E	L	F	A	L	T	D	A	E	S	E	E	H	Y	H	L
Template Known Secondary structure		G	G	G								T	T	T						T	T	T	.	T	T													T	T			G	G	G	S					T	T							T	T											T	S		T	T	S
Template Predicted Secondary structure																							.
Template SS confidence
		1139	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.		1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.
				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	V	K	R	L	K	P	I	D	E	Y	C	R	A	L	V	R	L	P	P	H	I	S	Q	C	D	E	V	F	R	F	F	E	A	R	P	E	D	V	N	P	P	K	E	D	Y	G	S	S	K	R	K	S	V	W	L	S	S	W	A	E	S	P	K	K	D	V	T	G	A	D	A	T	A	E	P	M	I
Query Conservation		.	.
Alig confidence		.	.																																																																											.	.
Template Conservation																																																																														.	.
Template Sequence		D	V	A	I	K	T	X	N	K	V	A	S	H	I	N	E	X	Q	K	I	H	E	E	F	G	A	V	F	D	Q	L	I	A	E	Q	T	G	E	K	K	E	V	A	D	L	S	X	G	D	L	L	L	H	T	S	V	I	W	L	N	P	P	A	S	L	G	K	W	K	K	E	P	E	L	A	A	.	.	F	V
Template Known Secondary structure																																		T	T		S	S		S		S	S					G	G	G										S	S							T	T		S	S						.	.
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		1218	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.			.	.
		168	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	Q	Y	V	V	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	T	A	V	V	L	V
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		1296	.	.	.	1300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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