Return to main results Retrieve Phyre Job Id

Job DescriptionA1A519
Confidence63.73%DateWed May 9 17:50:13 BST 2012
Rank1Aligned Residues23
% Identity39%Templatec3k1qC_
PDB info PDB header:virusChain: C: PDB Molecule:vp3b, the building block protein of inner shell; PDBTitle: backbone model of an aquareovirus virion by cryo-electron2 microscopy and bioinformatics
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   226...230.........240........
Predicted Secondary structure 





Query SS confidence 






















Query Sequence  NGFRCMACCRVFTTMEALQEHVQ
Query Conservation   
















 



Alig confidence 






















Template Conservation    
 
 

 
 
 
  


 
  
Template Sequence  SSYVCNVCNARFSTMSALSEHLR
Template Known Secondary structure 
TTTT
SSSS


S
Template Predicted Secondary structure 








Template SS confidence 






















   115....120.........130.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions