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Job DescriptionP07947
Confidence100.00%DateFri May 25 09:28:30 BST 2012
Rank37Aligned Residues246
% Identity22%Templatec3soaA_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase type ii subunit PDBTitle: full-length human camkii
Resolution3.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   274.....280.........290.........300.........310. ........320.........330.........340. ........
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Query Sequence  RESLRLEVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT. . . MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE. EPIYIVTE
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Template Sequence  TEEYQLFEELGKGSVVRRCVKVL. AGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD
Template Known Secondary structure 

TT.TTS
S


BTTB


SS
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   10.........20.........30.. .......40.........50.........60.........70.........80........
 
   350.........360.........370.........380.........390.........400......... 410.........420......
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Query Sequence  FMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGENLV. . . CKIADFGLARLIEDNEY
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Template Sequence  LVTGGELFEDIVAR. . EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ
Template Known Secondary structure 

B

B
..S


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SSTTSBSSTT




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B


TT

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   91........100.... .....110.........120.........130.........140.........150.........160........
 
   427..430.........440.........450.........460.........470.........480.........490 .........500...
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Query Sequence  TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVERGYR. . . MPCPQGCPESLHE
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Template Sequence  AWFG. FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV. GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD
Template Known Secondary structure  B


.S
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GGG

TT

B
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SST




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   169170.. .......180.........190.........200........ .210.........220.........230.........240......
 
   504.....510.........520....
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Query Sequence  LMNLCWKKDPDERPTFEYIQS
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Template Sequence  LINKMLTINPSKRITAAEALK
Template Known Secondary structure  S
SSTTTS

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   247..250.........260.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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