Job Description P07947 Confidence 100.00% Date Fri May 25 09:28:30 BST 2012 Rank 123 Aligned Residues 262 % Identity 26% Template c3ku2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:calmodulin-domain protein kinase 1; PDBTitle: crystal structure of inactivated form of cdpk1 from toxoplasma gondii,2 tgme49.101440 Resolution 2.30 Å

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		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.					.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.
Predicted Secondary structure																												.												.	.	.	.																																		.
Query SS confidence																												.												.	.	.	.																																		.
Query Sequence		I	P	R	E	S	L	R	L	E	V	K	L	G	Q	G	C	F	G	E	V	W	M	G	T	W	N	.	G	T	T	K	V	A	I	K	T	L	K	.	.	.	.	P	G	T	M	M	P	E	A	F	L	Q	E	A	Q	I	M	K	K	L	R	H	D	K	L	V	P	L	Y	A	V	V	S	E	.	E	P	I	Y
Query Conservation																												.												.	.	.	.																																		.
Alig confidence																												.												.	.	.	.																																		.
Template Conservation
Template Sequence		I	F	S	D	R	Y	K	G	Q	R	V	L	G	K	G	S	F	G	E	V	I	L	C	K	D	K	I	T	G	Q	E	C	A	V	K	V	I	S	K	R	Q	V	K	Q	K	T	D	K	E	S	L	L	R	E	V	Q	L	L	K	Q	L	D	H	P	N	I	M	K	L	Y	E	F	F	E	D	K	G	Y	F	Y
Template Known Secondary structure																	S	S									T	T	T											T	T	T	S		B	S	S																		T	T	B										S	S
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.				.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																																																													.	.	.
Query SS confidence																																																													.	.	.
Query Sequence		I	V	T	E	F	M	S	K	G	S	L	L	D	F	L	K	E	G	D	G	K	Y	L	K	L	P	Q	L	V	D	M	A	A	Q	I	A	D	G	M	A	Y	I	E	R	M	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	.	.	.	G	E	N	L	V	C	K	I	A	D	F	G	L	A	R	L	I	E
Query Conservation																																																													.	.	.
Alig confidence																	.	.																																											.	.	.															.	.
Template Conservation																	.	.																																																												.	.
Template Sequence		L	V	G	E	V	Y	T	G	G	E	L	F	D	E	I	.	.	I	S	R	K	R	F	S	E	V	D	A	A	R	I	I	R	Q	V	L	S	G	I	T	Y	M	H	K	N	K	I	V	H	R	D	L	K	P	E	N	L	L	L	E	S	K	S	K	D	A	N	I	R	I	I	D	F	G	L	S	.	.	T	H
Template Known Secondary structure									S		B						.	.	T	T		S																								T	T				S	S			G	G	G				S	S	S	S	T	T								T	T	T	T	.	.	T	T
Template Predicted Secondary structure																	.	.																																																												.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.				.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		D	N	E	Y	T	A	R	Q	G	A	K	F	P	I	K	W	T	A	P	E	A	A	L	Y	G	R	F	T	I	K	S	D	V	W	S	F	G	I	L	Q	T	E	L	V	T	K	G	R	V	P	Y	P	G	M	V	N	R	E	V	L	E	Q	V	E	R	G	.	.	.	Y	R	M	P	C	P	Q	G	C	P	E
Query Conservation																																																																				.	.	.
Alig confidence																									.																						.																					.	.	.
Template Conservation																									.																						.
Template Sequence		F	E	A	S	K	K	M	K	D	K	I	G	T	A	Y	Y	I	A	P	E	V	L	H	.	G	T	Y	D	E	K	C	D	V	W	S	T	G	V	I	L	Y	I	L	L	S	.	G	C	P	P	F	N	G	A	N	E	Y	D	I	L	K	K	V	E	K	G	K	Y	T	F	E	L	P	Q	W	K	K	V	S	E
Template Known Secondary structure		B					S					T	T		T	T	T								.	S				T																	.	S	S		S	S			S	S											T						S	G	G	G	G	G	S
Template Predicted Secondary structure																									.																						.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.			.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		S	L	H	E	L	M	N	L	C	W	K	K	D	P	D	E	R	P	T	F	E	Y	I	Q	S	.	.	F	L	E	D	Y	F	T	A	T	E	P	Q	Y	Q	P
Query Conservation																											.	.
Alig confidence																											.	.
Template Conservation
Template Sequence		S	A	K	D	L	I	R	K	M	L	T	Y	V	P	S	M	R	I	S	A	R	D	A	L	D	H	E	W	I	Q	T	Y	T	K	E	Q	I	S	V	D	V	P
Template Known Secondary structure											T		S	S	T	T	T	S								T	S							T		S	S			S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions