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Job DescriptionP07947
Confidence100.00%DateFri May 25 09:28:30 BST 2012
Rank211Aligned Residues240
% Identity21%Templatec3cekA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dual specificity protein kinase ttk; PDBTitle: crystal structure of human dual specificity protein kinase (ttk)
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   268.270.........280.........290.........300.........310.... .....320........ .330.........340..
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Query Sequence  DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMP. . . EAFLQEAQIMKKLR. . HDKLVPLYAVVSEE
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Template Sequence  QSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD
Template Known Secondary structure 
TT

SS
TT


SS

GGG
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S
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   516...520.........530.........540.........550.........560.........570.........580.........590.....
 
   343......350.........360.........370.........380.........390.........400.........410.........420..
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Query Sequence  PIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGENLVCKIADFGLARLIE
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Template Sequence  QYIYMVMECGNIDLNSWLKKK. . KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD. GMLKLIDFGIA. . . .
Template Known Secondary structure  S


S
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TT






GGGT.T


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   596...600.........610...... ...620.........630.........640.........650....... ..660........
 
   423......430.........440........ .450.........460.........470..... ....480........ .490.........
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Query Sequence  DNEYTARQGAKFPIKWTAPEAALYGR. FTIKSDVWSFGILQTELVTKGRVPYPG. MVNREVLEQVERG. YRMPCPQGCPE
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Template Sequence  . . . . . . . . . NQGTVNYMPPEAIKDMSKISPKSDVWSLGCILYYMTY. GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEK
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   669670.........680.........690.........700..... ....710.........720.........730........
 
   500.........510.........520....
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Query Sequence  SLHELMNLCWKKDPDERPTFEYIQS
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Template Sequence  DLQDVLKCCLKRDPKQRISIPELLA
Template Known Secondary structure  T
SSTTTS

T
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   763......770.........780.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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