Return to main results Retrieve Phyre Job Id

Job DescriptionP07947
Confidence100.00%DateFri May 25 09:28:30 BST 2012
Rank92Aligned Residues245
% Identity25%Templatec2zv2A_
PDB info PDB header:transferase/transferase inhibitorChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase kinase 2; PDBTitle: crystal structure of human calcium/calmodulin-dependent protein kinase2 kinase 2, beta, camkk2 kinase domain in complex with sto-609
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   272.......280.........290.........300. ........310.........320.........330.........340... ....
Predicted Secondary structure 











.













...
Query SS confidence 





























.









































. . .



Query Sequence  IPRESLRLEVKLGQGCFGEVWMGTWNGTTK. VAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEP. . . IYIV
Query Conservation 
          

 
 

 
          .



              
   
  
 
  

          ...   
Alig confidence 











..















.








....




























...



Template Conservation    
  
 
   
..
  
 
       
   



 
   ....     
   
  
 
 


                
Template Sequence  VQLNQYTLKDEI. . GKYGVVKLAYNENDNTYYAMKVLSKK. . . . EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMV
Template Known Secondary structure 
TT..


TTTT

....
T


TTB


SSSS
Template Predicted Secondary structure 




..








....












Template SS confidence 















































































   161........170.. .......180.........190........ .200.........210.........220.........230....
 
   348.350.........360.........370.........380.........390.........400.........410.........420.......
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  TEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGENLVCKIADFGLARLIEDNEYT
Query Conservation   
    
 
   
                       
  

     
 


  
 

       
 



          
Alig confidence 












...































































Template Conservation   
      
    ...            
   
   
  

   
 
 

   

         
 
 
           
Template Sequence  FELVNQGPVMEVP. . . TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL
Template Known Secondary structure 

TT
BS

SS...
SS


TT




GGG
TTS



TT

SSSS
Template Predicted Secondary structure 










...
































Template SS confidence 















































































   268.270.........280 .........290.........300.........310.........320.........330.........340....
 
   428.430.........440........ .450.........460.........470.........480........ .490.........500...
Predicted Secondary structure 










...













.









Query SS confidence 




















. . .







































.














Query Sequence  ARQGAKFPIKWTAPEAALYGR. . . FTIKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVERG. YRMPCPQGCPESLHE
Query Conservation              


      ...     



 
  
 

 
 
  
            
   .     
   
     
Alig confidence 




.














...


















.



















.














Template Conservation       .       

              





 





 .
  

           
                   
Template Sequence  LSNTV. GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVF. GQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKD
Template Known Secondary structure 



.S
GGG

GGG

TT


S.SS
SS

SS





SSS


Template Predicted Secondary structure 


.

















.





















Template SS confidence 















































































   345.... 350.........360.........370.........380...... ...390.........400.........410.........420..
 
   504.....510.........520.... ...
Predicted Secondary structure 






..
Query SS confidence 




















. .


Query Sequence  LMNLCWKKDPDERPTFEYIQS. . FLE
Query Conservation 

  
    
  

    
  .. 
 
Alig confidence 




















..


Template Conservation 

   
  

  


  


 

   
Template Sequence  LITRMLDKNPESRIVVPEIKLHPWVT
Template Known Secondary structure  T
S
TTTS

TT
Template Predicted Secondary structure 












Template SS confidence 

























   423......430.........440........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions