Job Description P07947 Confidence 100.00% Date Fri May 25 09:28:30 BST 2012 Rank 176 Aligned Residues 222 % Identity 28% Template c2z7qA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ribosomal protein s6 kinase alpha-1; PDBTitle: crystal structure of the n-terminal kinase domain of human rsk-1 bound2 to amp-pcp Resolution 2.00 Å

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		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.					.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.		.	.	.	.
Predicted Secondary structure																												.	.	.	.																																														.
Query SS confidence																												.	.	.	.																																														.
Query Sequence		E	I	P	R	E	S	L	R	L	E	V	K	L	G	Q	G	C	F	G	E	V	W	M	G	T	W	.	.	.	.	N	G	T	T	K	V	A	I	K	T	L	K	P	G	T	M	M	P	E	A	F	L	Q	E	A	Q	I	M	K	K	L	R	H	D	K	L	V	P	L	Y	A	V	V	S	E	.	E	P	I	Y
Query Conservation																												.	.	.	.																																														.
Alig confidence																												.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	D	P	S	H	F	E	L	L	K	V	L	G	Q	G	S	F	G	K	V	F	L	V	R	K	V	T	R	P	D	S	G	H	L	Y	A	M	K	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	A	D	V	N	H	P	F	V	V	K	L	H	Y	A	F	Q	T	E	G	K	L	Y
Template Known Secondary structure					G	G	G											T	T										S	S	S	S	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	B										T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	T	E	F	M	S	K	G	S	L	L	D	F	L	K	E	G	D	G	K	Y	L	K	L	P	Q	L	V	D	M	A	A	Q	I	A	D	G	M	A	Y	I	E	R	M	N	Y	I	H	R	D	L	R	A	A	N	I	L	V	G	E	N	L	V	C	K	I	A	D	F	G	L	A	R	L	I	E	D	N	E
Query Conservation
Alig confidence																				.	.																																																								.	.	.	.	.
Template Conservation																				.	.																																																								.	.	.	.	.
Template Sequence		L	I	L	D	F	L	R	G	G	D	L	F	T	R	L	S	K	E	.	.	V	M	F	T	E	E	D	V	K	F	Y	L	A	E	L	A	L	G	L	D	H	L	H	S	L	G	I	I	Y	R	D	L	K	P	E	N	I	L	L	D	E	E	G	H	I	K	L	T	D	F	G	L	S	K	E	.	.	.	.	.
Template Known Secondary structure								T	T		B									.	.	S	S																							T	T				T	T		S	G	G	G					S	S	S						S				S			.	.	.	.	.
Template Predicted Secondary structure																				.	.																																																								.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	A	R	Q	G	A	K	F	P	I	K	W	T	A	P	E	A	A	L	Y	G	R	F	T	I	K	S	D	V	W	S	F	G	I	L	Q	T	E	L	V	T	K	G	R	V	P	Y	P	G	M	V	N	R	E	V	L	E	Q	V	E	R	G	Y	R	M	P	C	P	Q	G	C	P	E	S	L	H	E	L	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																			.																					.
Template Conservation		.	.	.	.	.	.	.	.																																			.																					.
Template Sequence		.	.	.	.	.	.	.	.	G	T	V	E	Y	M	A	P	E	V	V	N	R	Q	G	H	S	H	S	A	D	W	W	S	Y	G	V	L	M	F	E	M	L	T	.	G	S	L	P	F	Q	G	K	D	R	K	E	T	M	T	L	I	L	K	A	.	K	L	G	M	P	Q	F	L	S	T	E	A	Q	S	L	L
Template Known Secondary structure		.	.	.	.	.	.	.	.			G	G	G							T	T	S																					.	S	S		S	S			S	S											T	.						T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																			.																					.
Template SS confidence
										224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		506	.	.	.	510	.	.	.	.	.	.						.	.	.	520	.	.	.	.
Predicted Secondary structure													.	.	.	.	.
Query SS confidence													.	.	.	.	.
Query Sequence		N	L	C	W	K	K	D	P	D	E	R	.	.	.	.	.	P	T	F	E	Y	I	Q	S
Query Conservation													.	.	.	.	.
Alig confidence													.	.	.	.	.
Template Conservation
Template Sequence		R	A	L	F	K	R	N	P	A	N	R	L	G	S	G	P	D	G	A	E	E	I	K	R
Template Known Secondary structure							S	S	T	T	T	S	T	T	S	S	S	S	T						T
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions