247 c2vagA_ Probab=100.00  E-value=4.1e-40  Score=233.12  Aligned_columns=261  Identities=25%

Q ss_pred             EECHHHEEEEEECCCCCCCEEEEEEECC--CCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCE------EEEEEEEECC
Q ss_conf             3035318996522787883699999769--9289999988210699999999999986489848------3488655179
Q batch____       271 EIPRESLRLEVKLGQGCFGEVWMGTWNG--TTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKL------VPLYAVVSEE  342 (543)
Q Consensus       271 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~--~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~h~~i------v~~~~~~~~~  342 (543)
                      ++-.++|+++++||+|+||.||+|+++.  ++.||||+++......+.+++|+.+|++++|+|+      +.+.+.....
T Consensus         9 ~~l~~~Y~i~~~LG~G~fG~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~Ei~il~~l~h~~~~~~~~~~~~~~~~~~~   88 (330)
T c2vagA_           9 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH   88 (330)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred             CEECCCEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
T ss_conf             48678259999987628848999999767983999999839905689999999999984312223312220000123332


Q ss_pred             CEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCCCCCCCCCCEEEECC
Q ss_conf             77999987898759999982788868999999999999999997531648841420003522643243323341045525
Q batch____       343 PIYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGENLVCKIADFGLARLIE  422 (543)
Q Consensus       343 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~h~dlk~~n~lv~~~~~~~l~dfgl~~~~~  422 (543)
                      ..+..+.....++....................+..+++.++.++|..+++|+|++|.|++++.++..++.||+.+....
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~nil~~~~~~~~~~~~~~~~~~~  168 (330)
T c2vagA_          89 GHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNKRDERTLI  168 (330)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEECCCEEEEES
T ss_pred             CEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCC
T ss_conf             00001221123675211122211101365655555445555543110122223455415898578862000345433444


Q ss_pred             CCCEEE----------ECCCCCCHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC-----
Q ss_conf             786122----------02455686778977994689975789999999999999288899998798999999980-----
Q batch____       423 DNEYTA----------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVER-----  487 (543)
Q Consensus       423 ~~~~~~----------~~~~~~~~~~~aPE~~~~~~~~~~~Diws~G~~l~el~t~g~~P~~~~~~~~~~~~i~~-----  487 (543)
                      ......          .........+.+||......++.+.|+|++||++|++.+ +..|+...+..+....+..     
T Consensus       169 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~~  247 (330)
T c2vagA_         169 NPDIKVVDFGSATYDDEHHSTLVRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMMERILGPL  247 (330)
T ss_dssp             CCCEEECCCSSCEETTSCCCSCCCCSCCHHHHTTSCCSTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHHHHHHCSC
T ss_pred             CCCCEEECCCCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEEECCCC-CCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf             4321000146633267542001210232100000111123542102258731004-889887589689999998513889


Q ss_pred             --------------------------------------CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHH
Q ss_conf             --------------------------------------899888878999999999987167977869999999999998
Q batch____       488 --------------------------------------GYRMPCPQGCPESLHELMNLCWKKDPDERPTFEYIQSFLEDY  529 (543)
Q Consensus       488 --------------------------------------~~~~~~p~~~p~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  529 (543)
                                                            ....+.+..+++++.+||.+||..||++|||+++|++  ..|
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~elL~--Hp~  325 (330)
T c2vagA_         248 PKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK--HPF  325 (330)
T ss_dssp             CHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT--SGG
T ss_pred             CHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHC--CCC
T ss_conf             988974420121235465665321000111001233310023565458999999999866588111776789967--911


Q ss_pred             HHHCC
Q ss_conf             63017
Q batch____       530 FTATE  534 (543)
Q Consensus       530 ~~~~~  534 (543)
                      |.+..
T Consensus       326 f~~ir  330 (330)
T c2vagA_         326 FDLLK  330 (330)
T ss_dssp             GGGGC
T ss_pred             HHHCC
T ss_conf             44039


