Return to main results Retrieve Phyre Job Id

Job DescriptionP07947
Confidence100.00%DateFri May 25 09:28:30 BST 2012
Rank142Aligned Residues238
% Identity26%Templatec2j2iB_
PDB info PDB header:transferaseChain: B: PDB Molecule:proto-oncogene serine/threonine-protein kinase pim-1; PDBTitle: crystal structure of the humab pim1 in complex with2 ly333531
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   275....280.........290.........300. ........310. ........320........ .330.........340. ..
Predicted Secondary structure 










.



.......



..



.

Query SS confidence 


























.









. . . . . . .
















. .












.

Query Sequence  ESLRLEVKLGQGCFGEVWMGTWNGTTK. VAIKTLKPGT. . . . . . . MMPEAFLQEAQIMKKLR. . HDKLVPLYAVVSE. EP
Query Conservation          

 
 

 
          .



      .......        
   
  
 ..
  

        .  
Alig confidence 


























.









.......
















..












.

Template Conservation    
 
   

 
 

 

 
    
    


 
                   
   
  
   




           
Template Sequence  SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS
Template Known Secondary structure  TTTTTTGGG



TT


SSS
SB


SS
Template Predicted Secondary structure 























Template SS confidence 















































































   36...40.........50.........60.........70.........80.........90.........100.........110.....
 
   344.....350.........360.........370.........380.........390.........400..... ....410.........420..
Predicted Secondary structure 





















.












Query SS confidence 





























































.
















Query Sequence  IYIVTEFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG. ENLVCKIADFGLARLIE
Query Conservation     
 
    
 
   
                       
  

     
 


  
 

 .      
 



     
Alig confidence 






















.





































.
















Template Conservation    

 
                 .            
   
   
   
 
  
   
          

 


      
Template Sequence  FVLILERPEPVQDLFDFITERGA. LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK
Template Known Secondary structure 

SS
S.

TT



SGGGTTTT


TT


Template Predicted Secondary structure 













.




























Template SS confidence 















































































   116...120.........130........ .140.........150.........160.........170.........180.........190....
 
   423......430.........440....... ..450.........460.........470.........480.........490.........500.
Predicted Secondary structure 












.
























Query SS confidence 
























.





















































Query Sequence  DNEYTARQGAKFPIKWTAPEAALYG. RFTIKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESL
Query Conservation                   


     .      



 
  
 

 
 
  
            
        
   
   
Alig confidence 











...









.



















.









.......















Template Conservation              ...                 





 






.
  

     .......
           
   
Template Sequence  DTVYTDFDGTRV. . . YSPPEWIRYHRYHGRSAAVWSLGILLYDMVC. GDIPFEHDEE. . . . . . . IIGGQVFFRQRVSSEC
Template Known Secondary structure  SS
B



S
GG...GS
S
B
.SS
S

S.......




SS


Template Predicted Secondary structure 











...





















.






.......










Template SS confidence 















































































   195....200...... ...210.........220.........230....... ..240....... ..250.........260...
 
   502.......510.........520....
Predicted Secondary structure 






Query SS confidence 






















Query Sequence  HELMNLCWKKDPDERPTFEYIQS
Query Conservation    

  
    
  

    
  
Alig confidence 






















Template Conservation    

   
  

  


  


 
Template Sequence  QHLIRWCLALRPSDRPTFEEIQN
Template Known Secondary structure  T
SSGGGS

T
Template Predicted Secondary structure 







Template SS confidence 






















   264.....270.........280......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions