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Job DescriptionP07947
Confidence100.00%DateFri May 25 09:28:30 BST 2012
Rank96Aligned Residues246
% Identity22%Templatec2bdwB_
PDB info PDB header:transferaseChain: B: PDB Molecule:hypothetical protein k11e8.1d; PDBTitle: crystal structure of the auto-inhibited kinase domain of2 calcium/calmodulin activated kinase ii
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   274.....280.........290....... ..300.........310.... .....320.........330.........340. .......
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Query Sequence  RESLRLEVKLGQGCFGEVWMGTWN. GTTKVAIKTLKPGTMMP. . . EAFLQEAQIMKKLRHDKLVPLYAVVSE. EPIYIVT
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Template Sequence  SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF
Template Known Secondary structure  TTTTTTTT


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   10.........20.........30.........40.........50.........60.........70.........80.........
 
   349350.........360.........370.........380.........390.........400..... ....410.........420.....
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Query Sequence  EFMSKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG. . . ENLVCKIADFGLARLIEDNE
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Template Sequence  DLVTGGELFEDI. . VAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE
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   90.........100. ........110.........120.........130.........140.........150.........160.......
 
   426...430.........440.........450.........460.........470.........480.........490 .........500..
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Query Sequence  YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILQTELVTKGRVPYPGMVNREVLEQVERGYR. . . MPCPQGCPESLH
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Template Sequence  AW. . HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV. GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK
Template Known Secondary structure  B
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S
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   169170 .........180.........190.........200........ .210.........220.........230.........240.....
 
   503......510.........520....
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Query Sequence  ELMNLCWKKDPDERPTFEYIQS
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Template Sequence  SLIDSMLTVNPKKRITADQALK
Template Known Secondary structure  S
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   246...250.........260.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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