Return to main results Retrieve Phyre Job Id

Job DescriptionQ8N427
Confidence100.00%DateWed Jun 6 09:55:08 BST 2012
Rank24Aligned Residues133
% Identity26%Templated1zs6a1
SCOP infoFerredoxin-like Nucleoside diphosphate kinase, NDK Nucleoside diphosphate kinase, NDK
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   451........460.... .....470.........480.........490.........500.........510.........520.........
Predicted Secondary structure 




.















Query SS confidence 













.
































































Query Sequence  QSTLGLIKPHATSE. QREQILKIVKEAGFDLTQVKKMFLTPEQIEKIYPKVTGKDFYKDLLEMLSVGPSMVMILTKWNAV
Query Conservation 
 

 





   .    

  
   

 
   
   

 
 
  

    

 
   

  




 


 
   


Alig confidence 













.
































































Template Conservation 
 

 






       

  
   

 

  
   

   
   
           

  
 


 
 
 
   


Template Sequence  ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRLVKYMASGPVVAMVWQGLDVV
Template Known Secondary structure 

TT
T



TGGGTTSTTTSS
STT
Template Predicted Secondary structure 























Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   530.........540.........550.........560.........570.........580......
Predicted Secondary structure 






















Query SS confidence 
























































Query Sequence  AEWRRLMGPTDPEEAKLLSPDSIRAQFGISKLKNIVHGASNAYEAKEVVNRLFEDPE
Query Conservation     
 
 




  
    
 



 

 
   



 


 
 
  

  

   
Alig confidence 















...





































Template Conservation     
 
 




  
 ...
 



 

     
 

 

    
 


  

   
Template Sequence  RTSRALIGATNPADAP. . . PGTIRGDFCIEVGKNLIHGSDSVESARREIALWFRADE
Template Known Secondary structure 

SSGGGS
...TTS

SGGG
S
SSS
GGG
Template Predicted Secondary structure 





...












Template SS confidence 
























































   102.......110....... ..120.........130.........140.........150.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions