Job Description Q8N427 Confidence 100.00% Date Wed Jun 6 09:55:08 BST 2012 Rank 2 Aligned Residues 135 % Identity 33% Template d1xqia1 SCOP info Ferredoxin-like Nucleoside diphosphate kinase, NDK Nucleoside diphosphate kinase, NDK Resolution 2.50

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Show / Hide Conservation and Alignment quality

		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.		.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure																		.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	Q	S	T	L	G	L	I	K	P	H	A	T	S	E	.	Q	R	E	Q	I	L	K	I	V	K	E	A	G	F	D	L	T	Q	V	K	K	M	F	L	T	P	E	Q	I	E	K	I	Y	P	K	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																		.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	E	K	T	L	L	I	L	K	P	D	A	V	A	R	G	L	V	D	E	I	I	S	R	F	K	K	A	G	L	K	I	V	A	L	K	X	V	K	A	S	P	E	E	I	E	R	F	Y	P	S	S	E	E	W	L	Q	S	A	G	Q	K	L	L	K	A	Y	Q	E	L	G	I	D	P	R	A	K	I	G
Template Known Secondary structure																	T	T													T																				S																						T								S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
									502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.											.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	G	K	D	F	Y	K	D	L	L	E	M	L	S	V	G	P	S	M	V	M	I	L	T	K	W	N	A	V	A	E	W	R	R	L	M	G	P	T	D	P	E	E	A	K	L	L	S	P	D	S	I	R	A	Q	F	G	I	S	K	L	.	.	.	.	.	.	.	.	.	.	K	N	I
Query Conservation		.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																													.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.
Template Sequence		T	D	D	P	V	E	V	G	R	I	I	K	R	N	L	V	K	Y	X	T	S	G	P	N	V	V	X	V	L	K	G	N	R	A	V	E	I	V	R	K	L	V	G	P	T	S	P	H	S	A	P	.	.	.	P	G	T	I	R	G	D	Y	S	I	D	S	P	D	L	A	A	E	E	G	R	V	V	F	N	L
Template Known Secondary structure																					T	S	S									S	T	T												S		G	G	G	S		.	.	.	T	T	S																T	T	S					S
Template Predicted Secondary structure																																																					.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		565	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	G	A	S	N	A	Y	E	A	K	E	V	V	N	R	L	F	E	D	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	A	S	D	S	P	S	E	A	E	R	E	I	R	F	W	F	R	E	E	E
Template Known Secondary structure						S	S														G	G	G
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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