Job Description Q8N427 Confidence 100.00% Date Wed Jun 6 09:55:08 BST 2012 Rank 26 Aligned Residues 151 % Identity 22% Template c4di6F_ PDB info PDB header:transferase Chain: F: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: crystal structure of nucleoside-diphosphate kinase from borrelia2 burgdorferi Resolution 2.40 Å

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		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.						.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																		.																																					.	.	.	.	.
Query SS confidence																		.																																					.	.	.	.	.
Query Sequence		S	M	K	L	E	K	T	L	A	L	L	R	P	N	L	F	.	H	E	R	K	D	D	V	L	R	I	I	K	D	E	D	F	K	I	L	E	Q	R	Q	V	V	L	S	E	K	E	A	Q	A	L	C	K	.	.	.	.	.	E	Y	E	N	E	D	Y	F	N	K	L	I	E	N	M	T	S	G	P	S	L	A
Query Conservation																		.																																					.	.	.	.	.
Alig confidence																		.																																					.	.	.	.	.
Template Conservation
Template Sequence		S	M	L	L	Q	K	T	L	C	I	V	K	P	D	G	V	R	R	G	L	I	G	D	V	V	S	R	F	E	R	V	G	L	K	M	V	A	A	K	M	L	I	V	D	E	S	L	A	K	K	H	Y	L	Y	D	D	I	V	F	R	H	S	E	A	V	W	N	S	L	I	K	F	I	S	N	S	P	V	F	T
Template Known Secondary structure			T	T															T	T													T																				S									S													T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.										.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.	.
Query Sequence		L	V	L	L	R	D	N	G	L	Q	Y	W	K	Q	L	L	G	P	R	T	V	E	E	A	I	E	Y	F	P	E	S	L	C	A	Q	F	A	M	D	S	L	P	.	.	.	.	.	.	.	.	.	V	N	Q	L	Y	G	S	D	S	L	E	T	A	E	R	E	I	Q	H	F	F	P	L	Q	S	T	L	G	L
Query Conservation																																												.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.															.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.
Template Sequence		F	V	V	E	G	V	E	S	I	E	V	V	R	K	L	C	G	A	T	E	P	K	L	A	I	.	.	.	P	G	T	I	R	G	D	F	S	Y	H	S	F	K	Y	S	N	E	K	G	F	S	I	Y	N	V	I	H	A	S	A	N	E	A	D	A	M	R	E	I	P	I	W	F	K	D	N	E	I	L	N	Y
Template Known Secondary structure								T												S	S	T	T	T			.	.	.	T	T	S																	T						S					S	S														G	G	G	S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.				.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		457	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	P	H	A	T	S	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	D	D	E	C	E	H	Y
Template Known Secondary structure				T	T					T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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