Job Description Q8N427 Confidence 100.00% Date Wed Jun 6 09:55:08 BST 2012 Rank 22 Aligned Residues 134 % Identity 31% Template c3q89H_ PDB info PDB header:transferase Chain: H: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: crystal structure of staphylococcus aureus nucleoside diphosphate2 kinase complexed with cdp Resolution 2.90 Å

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		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.		.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		L	Q	S	T	L	G	L	I	K	P	H	A	T	S	E	.	Q	R	E	Q	I	L	K	I	V	K	E	A	G	F	D	L	T	Q	V	K	K	M	F	L	T	P	E	Q	I	E	K	I	Y	P	K	V	T	G	K	D	F	Y	K	D	L	L	E	M	L	S	V	G	P	S	M	V	M	I	L	T	K	W	N	A
Query Conservation																	.
Alig confidence																	.
Template Conservation
Template Sequence		M	E	R	T	F	L	M	I	K	P	D	A	V	Q	R	N	L	I	G	E	V	I	S	R	I	E	R	K	G	L	K	L	V	G	G	K	L	M	Q	V	P	M	E	L	A	E	T	H	Y	G	E	H	Q	G	K	P	F	Y	N	D	L	I	S	F	I	T	S	A	P	V	F	A	M	V	V	E	G	E	D	A
Template Known Secondary structure																T	T													T																				T	G	G	G	T	T		S	S	S									T	S									S	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	E	W	R	R	L	M	G	P	T	D	P	E	E	A	K	L	L	S	P	D	S	I	R	A	Q	F	G	I	S	K	L	K	N	I	V	H	G	A	S	N	A	Y	E	A	K	E	V	V	N	R	L	F	E	D	P	E
Query Conservation
Alig confidence																			.	.	.
Template Conservation																			.	.	.
Template Sequence		V	N	V	S	R	H	I	I	G	S	T	N	P	S	E	A	S	.	.	.	P	G	S	I	R	G	D	L	G	L	T	V	G	R	N	I	I	H	G	S	D	S	L	E	S	A	E	R	E	I	N	L	W	F	N	E	N	E
Template Known Secondary structure												S	S	T	T	T	S		.	.	.	T	T	S								B	T	T	B		S						S														G	G	G
Template Predicted Secondary structure																			.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions