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Job DescriptionQ8N427
Confidence100.00%DateWed Jun 6 09:55:08 BST 2012
Rank14Aligned Residues133
% Identity26%Templatec3ngtJ_
PDB info PDB header:transferaseChain: J: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: structure of leishmania ndkb complexed with amp.
Resolution2.57 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   451........460.... .....470.........480.........490.........500.........510.........520.........
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Query Sequence  QSTLGLIKPHATSE. QREQILKIVKEAGFDLTQVKKMFLTPEQIEKIYPKVTGKDFYKDLLEMLSVGPSMVMILTKWNAV
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Template Sequence  ERTFIAVKPDGVQRGLVGEIIARFERKGYKLVALKILQPTTEQAQGHYKDLCSKPFFPALVKYFSSGPIVCMVWEGKNVV
Template Known Secondary structure 

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TGGGTTSTTTSS
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   530.........540.........550.........560.........570.........580......
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Query Sequence  AEWRRLMGPTDPEEAKLLSPDSIRAQFGISKLKNIVHGASNAYEAKEVVNRLFEDPE
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Template Sequence  KSGRVLLGATNPADSQ. . . PGTIRGDFAVDVGRNVCHGSDSVESAEREIAFWFKADE
Template Known Secondary structure 

SSGGG

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   84.....90......... 100.........110.........120.........130.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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