Job Description Q8N427 Confidence 82.80% Date Wed Jun 6 09:55:08 BST 2012 Rank 295 Aligned Residues 84 % Identity 18% Template c3gmfA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein-disulfide isomerase; PDBTitle: crystal structure of protein-disulfide isomerase from novosphingobium2 aromaticivorans Resolution 1.76 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																						.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	T	V	I	D	V	Y	Q	A	W	C	G	P	C	R	A	M	Q	P	.	L	F	R	K	L	K	N	E	L	N	E	D	E	I	L	H	F	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	R	L	V	E	F	V	S	Y	T	C	P	H	C	S	H	F	E	I	E	S	E	G	Q	L	K	I	G	M	V	Q	P	G	K	G	A	I	E	V	R	N	F	V	R	D	P	I	D	M	T	V	A	L	I	T	N	C	V	P	P	S	R	F	F	T	L	H	T	A	F	M	R	S	Q	A	Q	W	I	G
Template Known Secondary structure		S									T	T																			T	T	T	T	T	S											S													S															T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
																																																											67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	A	D	N	I	V	T	L	Q	P	F	R	D	K	C	E	P	V	F	L	F	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																																																																	.
Template Sequence		P	L	A	N	S	T	E	A	Q	R	Q	R	W	F	N	G	T	F	A	T	R	T	R	A	I	A	S	D	F	R	F	Y	D	F	M	A	A	R	G	M	D	R	S	T	L	D	R	C	L	S	N	E	A	L	A	K	K	L	A	A	E	T	D	E	A	I	N	Q	Y	N	V	S	G	T	P	S	F	M	I	.
Template Known Secondary structure													T	T	S	S	S													T	T							T	T	T											T																							S	S	S					.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		V	N	G	K	I	I	E	K	I	Q	G	A	.	N	A	P	L	V	N	K	K	V	I	N	L	I	D	E
Query Conservation														.
Alig confidence		.					.	.	.					.
Template Conservation		.					.	.	.
Template Sequence		.	D	G	I	L	.	.	.	L	A	G	T	H	D	W	A	S	L	R	P	Q	I	L	A	R	L	N	E
Template Known Secondary structure		.	T	T			.	.	.		T	T			S													T
Template Predicted Secondary structure		.					.	.	.
Template SS confidence
			216	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions